Sónia Carneiro

Colaborador (Doutorado)



Qualificações

  • 2010: Programa Doutoral em Engenharia Química e Biológica, Universidade do Minho

  • 2016 - 2020: Systems biology
  • 2013 - 2015: Docente integrado na subunidade: Centro de Engenharia Biológica
  • 2011 - 2012: A systems biology approach to uncover metabolic processes relevant to organ-specific metastasis
  • 2006 - 2010: A systems biology approach for the characterization of metabolic bottlenecks in recombinant protein production processes

Alunos de Investigação


Publicações Recentes

1
A comparative proteome analysis of Escherichia coli ΔrelA mutant cells
  • Frontiers in Bioengineering and Biotechnology, 4(78), 1-12, 2016
2
Metabolic responses to recombinant bioprocesses in Escherichia coli
  • Journal of Biotechnology, 164(3), 396-408, 2013
3
Influence of the RelA activity on E. coli metabolism by metabolite profiling of glucose-limited chemostat cultures
  • Metabolites, 2(4), 717-732, 2012
4
  • Duportet, X.; Aggio, R.B.M.; Carneiro, S.; Villas-Bôas, S.G.
The biological interpretation of metabolomic data can be misled by the extraction method used
  • Metabolomics, 8(3), 410-421, 2012
5
Semantic annotation of biological concepts interplaying microbial cellular responses
  • BMC Bioinformatics, 12(460), 2011
6
Stringent response of Escherichia coli: revisiting the bibliome using literature mining
  • Microbial Informatics and Experimentation, 1(1), 14, 2011
7
Metabolic footprint analysis of recombinant Escherichia coli strains during fed-batch fermentations
  • Molecular BioSystems, 7(3), 899-910, 2011
8
A systematic modeling approach to elucidate the triggering of the stringent response in recombinant E. coli systems
  • Advances in Intelligent and Soft Computing, 93, 313-320, 2011
9
Interpreting the regulatory interplay in E. coli metabolic pathways
  • Advances in Intelligent and Soft Computing, 93, 303-312, 2011
10
Challenges in integrating Escherichia coli molecular biology data
  • Briefings in Bioinformatics, 12(2), 91-103, 2011
11
A study of the short and long-term regulation of E. coli metabolic pathways
  • Journal of Integrative Bioinformatics, 8(3), 183, 2011
12
BioDR: semantic indexing networks for biomedical document retrieval
  • Expert Systems with Applications, 37(4), 3444-3453, 2010
13
Applying a metabolic footprinting approach to characterize the impact of the recombinant protein production in Escherichia coli
  • Advances in Intelligent and Soft Computing, 74 (Advances in Bioinformatics), 193-200, 2010
14
Data integration issues in the reconstruction of the genome-scale metabolic model of Zymomonas mobillis
  • Advances in Intelligent and Soft Computing, 49, 92-101, 2009
15
@Note: a workbench for biomedical text mining
  • Journal of Biomedical Informatics, 42(4), 710-720, 2009
16
Biomedical text mining applied to document retrieval and semantic indexing
  • Lecture Notes in Computer Science, 5518, 954-963, 2009
17
Assessment of physiological conditions in E. coli fermentations by epifluorescent microscopy and image analysis
  • Biotechnology Progress, 25(3), 882-891, 2009
Listagem Completa de Publicações