» Publications:
Publications in Conference Proceedings (with peer review)
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103. Amaral, A.L., Mesquita, D.P., Ferreira, E.C. Distinção de fenómenos
de bulking em lamas activadas por técnicas de análise de imagem.
14º ENaSB - Encontro Nacional de Saneamento Básico, SILUBESA - Simpósio
Luso-Brasileiro de Engenharia Sanitária e Ambiental – Adaptação e
Sustentabilidade de Serviços de Abastecimento de Água e de Águas
Residuais. 16 pgs., Porto, 26-29 Outubro de 2010. |
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102. Nádson M. N. Lima, Lamia Zuñiga Liñan, Flavio Manenti, Rubens
Maciel Filho, Marcelo Embiruçu, Eugénio C. Ferreira, Maria R. Wolf
Maciel. Modelagem e controle avançado não-linear multivariável por
lógica nebulosa: aplicação para um processo de copolimerização.
XVIII Congresso Brasileiro de Engenharia Química – COBEQ 2010,
19-22 Set 2010, Foz do Iguaçu, Brasil. 6 pp., 2010. |
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101. Soons, Zita I.T.A.; Ferreira, E.C.; Isabel Rocha Selection of
Elementary Modes for Bioprocess Control. Proceedings of the 11th
International Symposium on Computer Applications in Biotechnology (CAB
2010), Leuven, Belgium, July 7-9, 2010 Julio R. Banga, Philippe
Bogaerts, Jan Van Impe, Denis Dochain, Ilse Smets (Eds.), 156-161, 2010. |
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100. Dias, Óscar; Rocha, Miguel; Ferreira, E.C.; Rocha, I. Merlin:
Metabolic Models Reconstruction using Genome-Scale Information.
Proceedings of the 11th International Symposium on Computer Applications
in Biotechnology (CAB 2010), Leuven, Belgium, July 7-9, 2010
Julio R. Banga, Philippe Bogaerts, Jan Van Impe, Denis Dochain, Ilse
Smets (Eds.), 120-125, 2010. |
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99. Costa, Rafael; Machado, Daniel; Ferreira, E.C.; Rocha, I. Evaluating
the integration of proteomic data for the prediction of intracellular
fluxes after knockout experiments. Proceedings of the 11th
International Symposium on Computer Applications in Biotechnology (CAB
2010), Leuven, Belgium, July 7-9, 2010 Julio R. Banga, Philippe
Bogaerts, Jan Van Impe, Denis Dochain, Ilse Smets (Eds.), 114-119, 2010. |
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98. Machado, Daniel; Costa, Rafael; Rocha, M.; Rocha, I.; Tidor, B.;
Ferreira, E.C. Model transformation of metabolic networks using a Petri
net based framework. International Workshop on Biological Processes &
Petri Nets (BioPPN), Braga, Portugal, 21 June, pp: 101-115, 2010. |
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97. Nádson M. N. Lima, Lamia Zuñiga Liñan, Flavio Manenti, Rubens Maciel
Filho, Marcelo Embiruçu, Eugénio C. Ferreira, Maria R. Wolf Maciel.
Multivariable Nonlinear Advanced Control of Copolymerization Processes.
20th European Symposium on Computer Aided Process Engineering -
ESCAPE20, 6-9 June 2010, Ischia, Naples, Italy. S. Pierucci and
G. Buzzi Ferraris (Editors), Elsevier, 6 pp., 2010. |
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96. Morais, S; Mata, TM; Ferreira, E.C. Life cycle assessment of soybean
biodiesel and LPG as automotive fuels in Portugal. Chemical
Engineering Transactions, Vol. 19 [4th International
Conference on Safety & Environment in Process Industry - CISAP4,
S.S. Buratti, Ed., 14 -17 March 2010, Florence, Italy], 267-272, 2010. |
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95. Costa, R.S., Machado, D., Rocha, I., Ferreira, E.C.
Reconstruction
of dynamic metabolic networks: challenges, limitations and alternative
solutions. Jornadas de Bioinformática 2009, Lisboa 3-6
de Novembro de 2009, pp. 51-55. |
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94. Lourenço, I., Costa, H., Carneiro, S., Carreira, R., Rocha, M.,
Ferreira, E.C., Rocha, I.
Combining syntactic and ontological knowledge
to extract biologically relevant relations from scientific papers.
17th Annual International Conference on Intelligent Systems for Molcular
Biology & 8th European Conference on Computational Biology ISBMECCB
2009, Special Interest Group Meeting Program Materials, Stockolm,
June 27 – July 2, 2009, 237-240. |
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93. Costa, R.S., Machado, D., Rocha, I., Ferreira, E.C. Large scale
dynamic model reconstruction for the central carbon metabolism of
Escherichia coli. Lecture Notes in Computer Science 5518
(IWANN 2009, Part II, S. Omatu et al., Eds.) [3rd International
Workshop on Practical Applications of Computational Biology &
Bioinformatics - IWPACBB'09), Salamanca, Spain, 10th-12th June
2009], 1079-1083, 2009. |
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92. Evangelista, P., Rocha, I., Ferreira, E.C., Rocha, M. A software
tool for the simulation and optimization of dynamic metabolic models.
Lecture Notes in Computer Science 5518 (IWANN 2009, Part II, S.
Omatu et al., Eds.) [3rd International Workshop on Practical
Applications of Computational Biology & Bioinformatics - IWPACBB'09),
Salamanca, Spain, 10th-12th June 2009], 1071-1078, 2009. |
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91. Lourenço, A., Carneiro, S., Ferreira, E.C., Rafael Carreira, Luis M.
Rocha, Daniel Glez-Peña, José R. Méndez, Florentino Fdez-Riverola,
Fernando Diaz, Isabel Rocha and Miguel Rocha Biomedical Text Mining
Applied To Document Retrieval and Semantic Indexing. Lecture Notes in
Computer Science 5518 (IWANN 2009, Part II, S. Omatu et al., Eds.) [3rd
International Workshop on Practical Applications of Computational
Biology & Bioinformatics - IWPACBB'09), Salamanca, Spain, 10th-12th
June 2009], 954-963, 2009. |
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90. Machado, D., Costa, R.S., Rocha, M., Isabel Rocha, Bruce Tidor, E.C.
Ferreira A critical review on modelling formalisms and simulation tools
in Computational Biosystems. Lecture Notes in Computer Science
5518 (IWANN 2009, Part II, S. Omatu et al., Eds.) [3rd International
Workshop on Practical Applications of Computational Biology &
Bioinformatics - IWPACBB'09), Salamanca, Spain, 10th-12th June
2009], 1063-1070, 2009. |
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89. Maia, P., Rocha, I., Ferreira, E.C., Rocha, M.
Evaluating
evolutionary multiobjective algorithms for the in silico optimization of
mutant strains. 8th IEEE International Conference on
BioInformatics and BioEngineering (IEEE BIBE 2008), Athens,
Greece, 6 pp., 8-10 October 2008. |
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88. Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha,
Miguel Rocha.
A framework for the development of biomedical text mining
software tools. 8th IEEE International Conference on
BioInformatics and BioEngineering (IEEE BIBE 2008), Athens,
Greece, 6 pp., 8-10 October 2008. |
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87. Rui Mendes, Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira,
Isabel Rocha, Miguel Rocha,
A Framework for the Integrated Analysis of
Metabolic and Regulatory Networks. 8th IEEE International
Conference on BioInformatics and BioEngineering (IEEE BIBE 2008),
Athens, Greece, 6 pp., 8-10 October 2008. |
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86. Mesquita, D.P., Dias, O, Amaral, A.L., Ferreira, E.C.
Relationship
between sludge volume index and biomass structure within activated sludge systems.
Anais do XVII COBEQ – Congresso Brasileiro de Engenharia Química
(CD-ROM), Recife, Brasil, 14-17 Setembro de 2008, 7 pp. |
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85. Costa, J.C., Alves, M.M., Ferreira, E.C.
A chemometric tool to
monitor high-rate anaerobic granular sludge reactors during load and
toxic disturbances. Proceedings of the 10th International
Chemical and Biological Engineering Conference - CHEMPOR 2008,
E.C. Ferreira and M. Mota (Eds.), Braga, Portugal, September 4-6, 2008,
pp. 406-411 (ISBN: 978-972-97810-3-2). |
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84. Mesquita, D.P., Dias, O., Amaral, A.L., Ferreira, E.C.
Bright field
versus phase contrast microscopy in activated sludge image acquisition
methodologies. Proceedings of the 10th International Chemical
and Biological Engineering Conference - CHEMPOR 2008, E.C.
Ferreira and M. Mota (Eds.), Braga, Portugal, September 4-6, 2008, pp.
1778-1783 (ISBN: 978-972-97810-3-2). |
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83. Costa, R., Rocha, I., Ferreira, E.C.
Mathematical modeling of
recombinant Escherichia coli aerobic batch fermentations.
Proceedings of the 10th International Chemical and Biological
Engineering Conference - CHEMPOR 2008, E.C. Ferreira and M.
Mota (Eds.), Braga, Portugal, September 4-6, 2008, pp. 1995-2000 (ISBN:
978-972-97810-3-2). |
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82. Neri, D.F.M., Balcão, V.M., Costa, R.S., Ferreira, E.C., Torres,
D.P.M., Rodrigues, L.R., Carvalho Jr, L.B., Teixeira, J.A.
β-Galactosidase
from Aspergillus oryzae immobilized onto different magnetic supports: A
comparative experimental and modelling study of the
galactooligosaccharides production. Proceedings of the 10th
International Chemical and Biological Engineering Conference - CHEMPOR
2008, E.C. Ferreira and M. Mota (Eds.), Braga, Portugal,
September 4-6, 2008, pp. 1036-1041 (ISBN: 978-972-97810-3-2). |
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81. Lourenço, Anália, Sónia Carneiro, Rafael Carreira, Eugénio C.
Ferreira, Isabel Rocha, Miguel Rocha.
A tool for the
automatic and manual annotation of biomedical documents. Proceedings of the
Third International Symposium on Semantic Mining in Biomedicine – SMBM
2008. Turku, Finland, 8 pp., 1-3 September, 2008, 97-104.
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80. Rocha, I., Veloso, A.C.A., Carneiro, S., Costa, R., Ferreira, E.C.
Implementation of a specific rate controller in a fed-batch
E. coli
fermentation. Proceedings of the 17th IFAC (International
Federation of Automatic Control) World Congress, July 6-11,
2008, Seoul, Korea (Chung, M.J., Misra, P., Shim, H., Eds.),
15565-15570.
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79. Mesquita, D.P., Dias, O., Dias, A.M.A., Amaral, A.L., Ferreira, E.C.
Correlation between sludge settleability and image analysis information
using Partial Least Squares. Proceedings of the 11th
International Conference on Chemometrics in Analytical Chemistry -
CAC2008, Montpellier, France, 30 June - 4 July, 2008, Vol. 4,
175-179. |
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78. Costa, J.C., Alves, M.M., Ferreira, E.C.
Predicting effects of Toxic
Events to Anaerobic Granular Sludge with Quantitative Image Analysis and
Principal Component Analysis. Proceedings CD of the
International Symposium on Sanitary and Environmental Engineering -
SIDISA 08, Florence, Italy, 24-27 Junho, 2008, 8 pp. |
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77. Mesquita, D.P., Dias, O., A.L. Amaral, E.C. Ferreira,
Evaluation
of activated sludge systems by image analysis procedures.
Proceedings CD of the International Symposium on Sanitary and
Environmental Engineering - SIDISA 08, Florence, Italy, 24-27
Junho, 2008, 8 pp.
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76. Dias, O., D.P. Mesquita, A.L. Amaral, E.C. Ferreira,
Dilution
effects on aggregates and filaments contents in automated image analysis
methodologies. Proceedings CD of the International Symposium on
Sanitary and Environmental Engineering - SIDISA 08, Florence,
Italy, 24-27 Junho, 2008, 8 pp.
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75. Paulo, A., A.M.A. Dias, M.C. Sarraguça, J.A. Lopes, M.M. Alves,
E.C. Ferreira. Surveying an Activated Sludge Reactor using Online
UV-Visible and NIR Spectroscopy and Chemometrics Proceedings. CD
of the International Symposium on Sanitary and Environmental Engineering
- SIDISA 08, Florence, Italy, 24-27 Junho, 2008, 7 pp.
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74. Mesquita, D.P., R.R. Ribeiro, D. Teixeira, E.C. Ferreira, M.A.Z.
Coelho, SBR performance for synthetic and fishery wastewater treatment.
Proceedings of the 4th IWA Specialised Conference on Sequencing
Batch Reactor Conference SBR4 – Poster Presentations, 7-10
April 2008, Rome, p. 21-24.
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73. Lourenço, A., Simões, A., Almeida, J.J., Rocha, M., Rocha, I.,
Ferreira, E.C. An Ontology-Based Approach To Systems Biology Literature
Retrieval and Processing. New Trends in Artificial Intelligence -
Proceedings of the 13th Portuguese Conference in Artificial Intelligence
- EPIA 2007 (J. Neves, M.F. Santos, J.M. Machado, eds.), Dec 3-7,
2007, p. 541-552.
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72. Herrera, E, Ramírez, J., Castillo, B., Ferreira, E.C.
Modelo Exacto
Difuso de un Proceso Fermentativo Conmutado. Congreso Nacional de
Control Automático, AMCA 2007. Monterrey Nuevo León, 24 - 26 Oct
2007, 6 pp., (ISBN 978-970-32-5089-9). |
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71. Costa, J.C., Alves, M.M., Ferreira, E.C.
Integration of
morphological and physiological data through Principal Component
Analysis to identify the effect of organic overloads on anaerobic
granular sludge. Proceedings of the 11th IWA World Congress on
Anaerobic Digestion, 23-27 September 2007, Brisbane, Australia, 6
pp. |
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70. Costa, J.C., Moita, I., Ferreira, E.C., Alves, M.M.
Morphology and
physiology of anaerobic granular sludge exposed to organic solvents.
Proceedings of the 11th IWA World Congress on Anaerobic Digestion,
23-27 September 2007, Brisbane, Australia, 6 pp. |
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69. Espírito Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M.,
Ferreira, E.C. An Augmented Lagrangian Pattern Search Method for Optimal
WWTP Designs. Proceedings of the 6th WSEAS International Conference
on System Science and Simulation in Engineering (ICOSSSE ’07), Nov
21-23, 2007 Venice, Italy, p. 313-318. [ISBN: 978-960-6766-14-5; ISSN:
1790-5117]. |
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68. Espírito Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M.,
Ferreira, E.C. Cost Minimization of a WWTP Using an Augmented Lagrangian
Pattern Search Based Solver. Proceedings of the 10th IWA Specialised
Conference on Design, Operation and Economics of Large Wastewater
Treatment Plants, September 9-13, 2007, Vienna, Austria, p. 17-20.
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67. Dias, A.M.A., Alves, M.M., Ferreira, E.C. Application of
computational intelligence techniques for monitoring and prediction of
biological wastewater treatment systems. Proceedings on CD-ROM of the
3rd International IWA Conference on Automation in Water Quality
Monitoring - AutMoNet2007, September 5-7, 2007, Gent, Belgium, 8 pp.
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66. Dias, A.M.A., Moita, I., Pascôa, R., Alves, M.M., Lopes, J.A.,
Ferreira, E.C. Activated sludge process monitoring through in-situ NIR
spectral analysis. Proceedings on CD-ROM of the 3rd International IWA
Conference on Automation in Water Quality Monitoring - AutMoNet2007,
September 5-7, 2007, Gent, Belgium, 8 pp. |
65. Ginoris Y.P., Amaral A.L., Ferreira, E.C., Coelho M.A.Z, Nicolau A.
Aplicação de técnicas de análise de imagem e de estatística multivariável no
reconhecimento de protozoários e metazoários típicos de sistemas por lodos
ativados. 24º Congresso Brasileiro de Engenharia Sanitária e Ambiental,
ABES – Associação Brasileira de Engenharia Sanitária e Ambiental, Belo Horizonte,
Brasil, 2 a 7 de Setembro de 2007, 8 pp. (cd-rom)
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64. Herrera, E., Castillo, B., Ramírez, J., Ferreira, E.C. Exact Fuzzy Observer
for a Baker’s Yeast Fed-Batch Fermentation Process. FUZZ-IEEE 2007 - IEEE
International Conference on Fuzzy Systems, London, UK, 23-26 July 2007, pp.
1-6, 2007 (DOI: 10.1109/FUZZY.2007.4295502). |
63. Veloso, A.C.A., Rocha, I., Ferreira, E.C. Estimation of biomass
concentration using interval observers in an E. coli fed-batch fermentation.
Preprints – Vol 1 of the 10th International IFAC Symposium on Computer
Applications on Biotechnology, Cancún, México, June 4-6, 2007, 99-104, 2007. |
62. Herrera, E., Castillo, B., Ramírez, J., Ferreira, E.C. Exact Fuzzy Observer
for a Baker’s Yeast Fermentation Process. Preprints – Vol 1 of the 10th
International IFAC Symposium on Computer Applications on Biotechnology,
Cancún, México, June 4-6, 2007, 309-314, 2007. |
61. Herrera, E., Castillo, B., Ramírez, J., Ferreira, E.C. Takagi-Sugeno
Multiple-Model controller for a continuous baking yeast fermentation process.
Proceedings of the ICINCO 2007, Fourth international conference on informatics
in control, automation and robotics. Angers France, May 9-12, 2007. (ISBN
978-972-8865-82-5), pp. 436-439, 2007.
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60. Rocha, M., Pinto, J.P., Rocha, I., Ferreira, E.C. Optimization of Bacterial
Strains with Variable-Sized Evolutionary Algorithms. Proceedings of the 2007
IEEE Symposium on Computational Intelligence in Bioinformatics and Computational
Biology (CIBCB 2007), Honolulu, Hawaii, April 1-5, 2007, IEEE Computational
Intelligence Society, (ISBN: 1-4244-0698-6), CD-ROM, pp. 331-337, 2007.
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59. Espírito-Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M., Ferreira, E.C.
Contribution of a Simple Sludge Treatment in a WWTP Optimization Procedure.
Proceedings of the 5th WSEAS Int. Conf. on System Science and Simulation in
Engineering, Tenerife, Canary Islands, Spain, December 16-18, 2006, pp.
54-59, 2006. |
58. Vaz, A.I.F., Ferreira, E.C., Mota, A.M.T., Optimal trajectory approximation
by cubic splines on fed-batch control problems. Proceedings of the 5th
WSEAS Int. Conf. on System Science and Simulation in Engineering,
Tenerife, Canary Islands, Spain, December 16-18, 2006, pp. 130-135.
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57. Amaral, A.L., Mota, M., Ferreira, E.C., Crispim, A., Image analysis
methodology to study the evolution of chromium penetration in chromium tannage.
Computational Modelling of Objects Represented in Images: Fundamentals,
Methods and Applications, Coimbra, CD-ROM, 4 pp, 2006. |
56. Mesquita, D.P., Coelho, M.A.Z., Ferreira, E.C. Efeito do sal no desempenho
de um reator batelada sequencial. XVI Congresso Brasileiro de Engenharia
Química - COBEQ2006, Associação Brasileira de Engenharia Química, CD-ROM, 7
pp., Santos, Brasil, 24-27 Setembro de 2006. |
55. Espírito-Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M., Ferreira, E.C.
Optimization and simulation of secondary settler models. 6th WSEAS
International Conference on Simulation, Modelling and Optimization, A.
Madureira (Ed.), (ISSN: 1790-5117, ISBN: 960-8457-53-X), CD-ROM, 240-245,
Lisboa, Setembro de 2006. |
54. Rocha, I., Ferreira, E.C. Specific growth rate regulation in a simulated
fed-batch E. coli fermentation. CONTROLO2006 – 7th Portuguese Conference on
Automatic Control, Associação Portuguesa de Controlo Automático e Instituto
Superior Técnico (Proceedings in CD-ROM, ISBN 978-972-97025-2-5), Lisboa, 11-13
de Setembro, 6 pp., 2006. |
53. Mendes, R., Rocha, I., E.C. Ferreira, Rocha, M.A Comparison of
algorithms for the optimization of fermentation processes. 2006 IEEE Congress
on Evolutionary Computation: Proceedings, Vancouver (ISBN: 0-7803-9487-9),
IEEE Press, 7371-7378, 2006. |
52. Vaz, A.I.F., Ferreira, E.C. Optimal control of fed-batch processes with
particle swarm optimization. Contribuciones a la Estadística y a la
Investigación Operativa (Actas del XXIX Congreso Nacional de Estadística e
Investigación Operativa), Sícilia et al. (eds.), La Laguna, Tenerife, 972-986,
2006 (em CD-ROM, ISBN 84-690-8552-X).
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51. Rocha, I., Veloso, A.C.A., Ferreira, E.C. Design of estimators for specific growth rate
control in a fed-batch E. coli fermentation. Proceedings 5th MATHMOD Vienna –
5th Vienna Symposium on Mathematical Modelling, Volume 2: Full Papers CD (I.
Troch, F. Breitenecker, Eds.), Vienna University of Technology, Austria,
February 8-10, 2006, ARGESIM - Verlag, Vienna, 1.1-1.9, 2006 (ISBN
3-901608-30-3). |
50. Araya Kroff, P., Amaral, A.L., Mota, M. Ferreira, E.C., Alves, M.M. Análisis
de imagen para la cuantificación de cambios morfológicos en biomasa granular,
inducidos por la presencia de nitrato en reactores EGSB. XVI Congreso de
Ingeniería Sanitaria y Ambiental Aidis – Chile, II Simposio Latinoamericano de
Lodos y Biosólidos, Viña del Mar, 23-26 de Outubro, 6 pp., 2005.
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49. Vivanco, E, Puñal, A., Pizarro, C., Ferreira, E.C., Alves M. M., Chamy, R.
Effect of addition of an ammonium source in UASB and EGSB reactors when treating
low concentrated wastewater: granules morphology. VIII Latin American
Workshop and Symposium on Anaerobic Digestion. Montevideo, Punta del Este,
Uruguay. 2 - 5 October 2005, 4 pp., 2005. |
48. Carneiro, S., Veloso, A.C.A., Amaral, A.L., Rocha, I., E.C. Ferreira. Image
analysis as a tool for viability and recombinant protein production assessment
during E. coli fermentations. CHEMPOR 2005 - 9th International Chemical
Engineering Conference – Full Papers in CD-ROM (ISBN: 972-8055-13-7),
Departamento de Engenharia Química da Universidade de Coimbra, 6 pp., 2005.
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47. Veloso, A.C.A., Rocha, I., E.C. Ferreira. Design
of Interval Observers for an E. coli Fed-Batch Fermentation with Uncertain
Inputs. CHEMPOR 2005 - 9th International Chemical Engineering Conference –
Full Papers in CD-ROM (ISBN: 972-8055-13-7), Departamento de Engenharia
Química da Universidade de Coimbra, 6 pp., 2005.
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46. Amaral, A.L, Rocha, O., Gonçalves, C., Ferreira, A.A., E.C. Ferreira.
Development of Image Analysis Methods to Evaluate Barley / Malt Grain Size.
CHEMPOR 2005 - 9th International Chemical Engineering Conference – Full Papers
in CD-ROM (ISBN: 972-8055-13-7), Departamento de Engenharia Química da
Universidade de Coimbra, 6 pp., 2005. |
45. Vidigueira, F., E.C. Ferreira. Estratégias de Minimização de Efluentes
na Síntese e Integração de Processos. CHEMPOR 2005 - 9th International
Chemical Engineering Conference – Full Papers in CD-ROM (ISBN:
972-8055-13-7), Departamento de Engenharia Química da Universidade de Coimbra, 6
pp., 2005. |
44. Rocha, M., Rocha, I., E.C. Ferreira A New Representation in Evolutionary
Algorithms for the Optimization of Bioprocesses. 2005 IEEE Congress on
Evolutionary Computation: Proceedings (ISBN: 0-7803-9363-5), IEEE Press,
484-490, 2005.
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43. Pires, O.C., Palma, C., Moita,
I., Costa, J.C., M.M. Alves, E.C. Ferreira, A Fuzzy-Logic Based Expert System
for Diagnosis and Control of an Integrated Wastewater Treatment. Proceedings
of the 2nd Mercosur Congress on Chemical Engineering – ENPROMER and 4th Mercosur
Congress on Process Systems Engineering (ISBN: 85-7650-043-4). Rio de
Janeiro, Brasil, 8 págs. (em CD-ROM), 2005. |
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42. Veloso, A.C.A., I. Rocha, E.C.
Ferreira, On-Line Estimation of Biomass in an E. coli Fed-Batch Fermentation.
Proceedings of the 2nd Mercosur Congress on Chemical Engineering – ENPROMER and
4th Mercosur Congress on Process Systems Engineering (ISBN: 85-7650-043-4).
Rio de Janeiro, Brasil, 10 págs. (em CD-ROM), 2005. |
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41. Amaral, A.L., Alves, M., Mota,
M., Ferreira, E.C., Aplicações de Técnicas de Processamento e Análise de Imagem
em Processos Biotecnológicos. Anais do XV Simpósio Nacional de Bioprocessos –
SINAFERM 2005. Recife, Brasil, 2005, 7 págs. (em CD-ROM).
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40. Amaral, A.L., Ricardo Pinto,
Joana Carvalho, Eugénio Campos Ferreira, Miguel Gama, Determinação da
Concentração de CBD-FITC Adsorvidos em Fibras por Análise de Imagem. Anais do
XV Simpósio Nacional de Bioprocessos – SINAFERM 2005. Recife, Brasil, 2005,
7 págs. (em CD-ROM).
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39. da Motta Sobrinho, Maurício A.,
Marie-Noelle Pons, Valdinete Lins da Silva, Aline Clemente de Andrade, António
Luis Amaral, Eugénio C. Ferreira, Utilização do Processamento Digital de Imagens
no Monitoramento de Estações de Tratamento de Efluentes. Anais do XV Simpósio
Nacional de Bioprocessos – SINAFERM 2005. Recife, Brasil, 2005, 7 págs. (em
CD-ROM). |
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38. Pacifico, D.G.P., Eugénio C.
Ferreira, Beatriz Vahan Kilikian, Influência da velocidade específica de
crescimento de Monascus purpureus ATCC36928 na produção de pigmentos vermelhos.
Anais do XV Simpósio Nacional de Bioprocessos – SINAFERM 2005. Recife,
Brasil, 2005, 7 págs. (em CD-ROM). |
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37. Veloso, A., Rocha, I., E. C. Ferreira, Design of
on-line state estimators for a recombinant E. coli fed-batch fermentation. Preprints of the 16th IFAC World Congress (Horacek, P., Simandl, M.,
Zitek, P., eds.), 4-8 de Julho de 2005, Praga, República Checa, 6 págs. (em
CD-ROM). |
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36. Espírito-Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M., Ferreira, E.C. Biological Process Optimal Design in a Wastewater Treatment Plant.
6th World Congress on Structural and Multidisciplinary Optimization, Rio
de Janeiro, 8 pp., 30 Maio a 3 de Junho 2005.

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35. O. C. Pires, C. Palma, J. C. Costa, I. Moita, M. M. Alves,
Ferreira, E.C. Knowledge-based
fuzzy system for diagnosis and control of an integrated biological wastewater
treatment process. Proceedings of the 2nd IWA Conference on Instrumentation, Control and
Automation, Busan, Korea, May 29 - June 2, Vol. 1, 247-255, 2005.
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34. Vaz, A.I.F.,
Ferreira, E.C. Air Pollution
Control with Semi-Infinite Programming. Actas del Congreso XXVIII Congreso Nacional de Estadística e Investigación Operativa (SEIO),
Cádiz, 14 pp., 2004. (em CD-ROM, ISBN 84-609-0438-5). |
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33. Espírito-Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M., Ferreira, E.C.
Optimization of Wastewater Treatment Processes. Actas del Congreso XXVIII Congreso Nacional de Estadística e Investigación Operativa (SEIO),
Cádiz, 20 pp., 2004. (em CD-ROM, ISBN 84-609-0438-5). |
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32. Vaz, A.I.F., Ferreira, E.C.
Optimização e Controlo da Poluição Atmosférica.
8ª Conferência Nacional de
Ambiente, Lisboa, 27-29 de Outubro, 15 pp, 2004.

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31. Espírito-Santo, I.A.C.P., Fernandes, E.M.G.P., Araújo, M.M., Ferreira, E.C.
Optimização de um Processo Biológico de Tratamento de Águas
Residuais. 8ª Conferência Nacional de
Ambiente, Lisboa, 27-29 de Outubro, 11 pp, 2004. |
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30. M.M. Alves, M.A. Pereira, A.L. Amaral, M.-N. Pons, M. Mota, Ferreira, E.C.
Image Analysis as a Tool to Predict Washout in Sludge Bed Reactors Through the
Quantification of Microbial Filamentous Structures.
Proceedings of the 10th World
Congress on Anaerobic Digestion, Montreal, vol. I, 420-425, 2004.
 |
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29. Araya-Kroff, P., Amaral, A.L., Ferreira, E.C.,
Silva, P., Mota, M., Alves, M.M.
Monitoring granular stability in an
industrial UASB reactor treating brewery wastewater.
Proceedings of the 10th World
Congress on Anaerobic Digestion, Montreal, vol. 4, 2309-2312,
2004.
 |
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28. Araya-Kroff, P., Amaral, A.L.,
Mota, M.,
Ferreira, E.C., Alves, M.
Image analysis to
quantify morphological changes in granular sludge induced by nitrate in EGSB
reactors. Proceedings of the 10th World
Congress on Anaerobic Digestion, Montreal, vol. 4, 1907-1911, 2004.
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27. Ferreira, E.C.
Blended Learning in Bioprocess Systems Engineering Education: Issues, Methods,
and Applications. ESCAPE-14: European Symposium on
Computer Aided Process Engineering. Lisboa, 16-19 Maio, 6 pp., 2004.
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26. Coutinho, J.A.P., Coelho, M.A.Z., Ferreira, E.C.,
Belo, I.
Determination and
modeling of yeast viability under stress conditions.
ESCAPE-14: European Symposium on
Computer Aided Process Engineering. Lisboa, 16-19 Maio, 6 pp., 2004.
 |
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25. Rocha, I., Ferreira, E.C.
Yield and kinetic parameters estimation and model reduction in a recombinant E.
coli fermentation. ESCAPE-14: European Symposium on
Computer Aided Process Engineering. Lisboa, 16-19 Maio, 6 pp., 2004.
 |
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24. V. Lyubenova, I. Rocha, Ferreira, E.C. Estimation of Biomass Concentration
and Multiple Specific Growth Rates of Fed-Batch Fermentation of Recombinant
E. coli. Proceedings of International Conference Automatics and Informatics’03, Vol
1 (Sendov, B., Boyanov, K., Sgurev, V., Eds.), 6-8 October 2003, Sofia,
Bulgaria, 211-214, 2003.
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23. Araya-Kroff, P., Amaral, A.L.,
Neves, L., Ferreira, E.C.,
Alves, M.M., Mota, M.
Image analysis as a tool to
recognize anaerobic granulation time. Proceedings of the VII Latin American
Workshop and Symposium on Anaerobic Digestion (Oral Papers), IWA, Mérida,
Mexico, 31-38, 2002
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22. Amaral, A.L., S. Rodrigues, M. Mota,
E.C. Ferreira,
Morphological Characterisation of Biomass in Wastewater Treatment using Partial
Least Squares. Proceedings of the Second IASTED International Conference on Visualization,
Imaging, and Image Processing (J.J. Villanueva, Ed.), Málaga, Espanha, 9-12
Setembro 2002, Acta Press, Anaheim, 300-305, 2002. ISBN: 0-88986-354-3
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21. Da Motta
M., Amaral L.P., Neves L., Araya P.,
E.C. Ferreira, Alves M.M., Mota M., Roche N., Vivier H., Pons M.N. Efeito da
Diluição na Caracterização da Biomassa de Sistemas de Tratamentos de
Efluentes por Análise de Imagem. COBEQ 2002
- XIV Congresso Brasileiro de Engenharia Quimica, Natal (Brasil), 9
pp., 2002.
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20. Rocha,
I., E.C. Ferreira, Model-Based
Adaptive Control of Acetate Concentration During the Production of
Recombinant Proteins with E. coli. Proceedings of the 15th
IFAC World Congress on Automatic Control, Volume Q: Modeling and Control
of Agricultural, Biological and Chemical Systems, (E.F. Camacho, L.
Basañez, J.A. de la Puente, Eds.), Barcelona, Spain, July 21-26, 2002,
Pergamon Press, Oxford, 461-466, 2003.
 |
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19. I. Rocha,
E.C. Ferreira, Optimisation
Methods for Improving Fed-Batch Cultivation of E. coli Producing
Recombinant Proteins.
Proceedings of the 10th Mediterranean Conference on Control and
Automation (MED2002), Lisbon, Portugal, Julho 9-12, 6p. (CD-ROM),
2002.
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18. Pereira,
M.A., Roest, K., Stams, A.J.M., Akkermans, A.D.L., Amaral, A.L., Pons,
M.-N., E.C. Ferreira, Mota, M.,
Alves, M.M. Image Analysis,
Methanogenic Activity Measurements and Molecular Biological Techniques
to Monitor Granular Sludge from an EGSB Reactor Fed With Oleic Acid.
International Specialised Conference on Biofilm Monitoring, IWA.,
343-346, March 17-20 2002, Porto, Portugal.
 |
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17. Amaral,
A.L., M. da Motta, M.N. Pons, H. Vivier, M. Mota,
E.C. Ferreira. Survey of a
Wastewater Treatment Plant Microfauna by Image Analysis. 8th
International Chemical Engineering – CHEMPOR’2001, F. Ramôa Ribeiro,
J.J.C. Cruz Pinto (Eds.), Universidade de Aveiro, Vol. 2, 1137-1144,
Aveiro, Portugal 2001 (ISBN: 972-789-041-5).
 |
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16. Amaral,
A.L., Pereira, M.A., Neves, L., da Motta, M., Pons M.-N., Vivier, H.,
Mota, M., E.C. Ferreira, Alves,
M.M. Characterisation by image analysis of anaerobic sludge from two EGSB
reactors treating oleic acid: automatic detection of granules
disintegration. 9th World
Congress on Anaerobic Digestion, Proceedings Part 1, Technological
Instituut, Antwerpen, Belgium, September 2-5, 89-94, 2001.
 |
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15. da Motta,
M., Pons, M.N., Vivier, H., Amaral, A.L.,
E.C. Ferreira, Mota, M. Study of
Protozoa Population in Wastewater Treatment Plants by Image Analysis. CD-ROM do
XIX Interamerican Congress of Chemical Engineering/XIV Brazilian
Congress of Chemical Engineering, Águas de São Pedro, Brazil, 24-27
de Setembro, 2000.
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14. Lubenova,
V., Ferreira, E.C. Adaptive
Algorithms for Estimation of Multiple Biomass Growth Rates and Biomass
Concentration in a Class of Bioprocesses.
Proceedings of CONTROLO'2000: 4th Portuguese Conference on Automatic
Control, 289-294, 2000.
 |
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13. da Motta,
M., Pons, M.N., Roche, N., Amaral, A.L.,
Ferreira, E.C., Alves, M., Mota, M. Automated
Monitoring of Activated Sludge Using Image Analysis. Texts of
Posters of the 1st World Congress of the International Water Association,
3-7 July 2000, Paris, France (edição em CD-ROM).
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12. Alves, MM,
Cavaleiro, A.J., E.C. Ferreira,
Amaral, A.L., Mota, M., da Motta, M., Vivier, H., Pons, M.-N. Characterization by Image Analysis of Anaerobic Microbial Aggregates
under Shock Conditions. Proceedings of the 4th International Symposium on Environmental Biotechnology
(10-12 April 2000, Noordwijkerhout, The Netherlands). S. Hartmans, P.
Lens, Eds., 127-130, 2000.
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11. Baeza, J.,
Ferreira, E.C., J. Lafuente, Knowledge-based supervision and control of WWTP: A real-time
implementation. Proceedings of the 4th International Symposium on Environmental Biotechnology
(10-12 April 2000, Noordwijkerhout, The Netherlands). S. Hartmans, P.
Lens, Eds., 79-82, 2000.
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10. da
Motta, M., Pons, M.-N., Roche, N., Amaral, A.L.,
E.C. Ferreira, Mota, M. Analyse des
Flocs Bactériens et de la Microfaune des Boues Activées para Analyse
d'Image. GRUTTEE - 3e Congrès Internatonal L'Eau et sa Réutilisation, 3rd
International Research Conference Water Reuse - Water Treatment Plants
Operation, Toulouse, 321-326, 1999.
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9. Amaral,
A.L., Mota, M.,
E.C. Ferreira, Aplicações de
Técnicas de Análise de Imagem em Microbiologia Ambiental. Actas da 6º Conferência Nacional sobre a Qualidade do Ambiente, 2º
Volume, Lisboa, 29-38, 1999.
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8. Baeza, J.,
Ferreira, E.C., Lafuente, J. A Knowledge-Based
Distributed System for Supervision and Control of Wastewater Treatment
Processes. Water Quality
International '98 (Preprints from the 19th Biennial Conference of
the International Association on Water Quality), Vancouver, Canada,
21-26 June 1998.

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7. Amaral,
A.L., Alves, M.M., Mota, M.,
Ferreira, E.C.
Morphological
Characterization of Microbial Aggregates by Image Analysis. RECPAD'97 - 9th Portuguese Conference on Pattern Recognition, (APRP, Eds.),
95-100, Coimbra, 1997. |
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6. Rocha,
C., Ferreira, E.C.
Identification
of yield coefficients in a baker’s yeast model - An optimal design experimental
approach. Comunicaciones del III Congresso Ibérico de Biotecnologia - BIOTEC’96, (Fernández-Polanco,
F., Benito, G.G., Encina, P.A.G., Miranda, M.M.P., Eds.), Universidad de
Valladolid, 93-96, 1996. |
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5.
Ferreira, E.C., Feyo de Azevedo, S.
A New Adaptive
Scheme for the Adaptive Linearizing Control of Bioprocesses. Proceedings of the 2nd Portuguese Control Conference on Automatic Control -
CONTROLO 96, Porto, Vol. I, 153-157, 1996. |
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4.
Ferreira, E.C., Feyo de Azevedo, S.
Adaptive Linearizing Control of Bioreactors. UKACC International Conference on CONTROL'96, Exeter, IEE Conference
Conference Publication No. 427, Vol. II, 1184-1189, 1996. |
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3. R. Oliveira,
Ferreira, E.C., F. Oliveira, Feyo de Azevedo, S.
A Study on the Convergence
of Observer-Based Kinetics Estimators in Stirred Tank Bioreactors. Proc. 5th International Symposium on Process Systems Engineering, Kyongju,
Korea, 1994, (E.S. Yoon, ed. Korean Institute of Chemical Engineers), vol. I,
pp. 683-687. |
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2. Oliveira, F.,
Ferreira, E.C., Feyo de Azevedo, S.
Requisitos e realização de
uma instalação experimental para estudos de modelação e controlo em
processos de fermentação. 1º Encontro Português de
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1.
Ferreira, E.C., Duarte, J.C. Aplicação de
Técnicas de Estimativa em Linha em Engenharia de Bioprocessos. CONGRESSO 89 da Ordem dos Engenheiros, Tema 5: Problemas Actuais e
Avanços em Processos Químicos, pp.59-73, Coimbra, 1989. |
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